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The
cDNA GEArray is our first generation pathway-focused DNA
microarrays and still has the most comprehensive
coverage of biological pathways and disease states for
human and mouse. The nylon membrane array matrix is a
permeable support with a high DNA binding capacity. The
production process employs a reproducible non-contact
printing technology to prevent deformations in the
membrane. The carefully designed gene-specific
double-stranded 250 to 600 bp cDNA fragments printed on
each cDNA GEArray minimizes any cross-hybridization
between spots on the same array despite the
representation of closely related members of the same
gene families. The optimized target synthesis and
labeling protocol generates amplified and labeled cDNA
only for the genes represented by the cDNA fragments on
the array. The biotinylated cDNA target and the
carefully designed cDNA fragments on the array
correspond to the same gene-specific sequences
permitting efficient and specific hybridization. The
cDNA GEArray is also optimized for the popular
chemiluminescent detection method, which allows the use
of either X-ray film or a CCD-camera imaging system for
image acquisition.
Summary of cDNA GEArray Technology Features
| Feature |
Specification |
Benefits |
| Matrix |
Nylon membrane |
High nucleic acid binding capacity |
| Printing Technology |
Non-contact printing |
Reproducible
Prevents deformations in the membrane |
| Probe Sets |
~ 450 bp dsDNA |
High specificity |
| Target Labeling |
Biotin-cDNA from
AmpoLabeling-LPR™ |
One-tube linear amplification
Matches probe set |
| Detection |
Chemiluminescence |
Allows use of X-ray film or CCD camera |
With
the publication of over one hundred scientific papers
employing this technology, the cDNA GEArray is proven and
trusted for pathway-focused gene expression studies.
However, these products are continually being updated to
their Oligo GEArray equivalents. For a complete overview of
the cDNA GEArray technology, click [here].
Two
different spotting and density formats available:
We offer two different formats of cDNA GEArrays, the Q
Series and the S Series.
Only the spotting patterns differ between the two formats.
The Q Series microarrays contain up to 96 genes arrayed in
a unique and easily recognizable tetra-spot pattern. The S
Series microarrays contain up to 480 genes arrayed as
single spots. Both formats also contain similar
housekeeping genes and negative controls.
The
cDNA GEArrays are only available in the same format HybTube
Format as the Oligo GEArray and are designed to be
processed using a standard hybridization oven. The cDNA
GEArrays are NOT available in the HybPlate format
How
It Works:
Click
here
to see an overview of the experimental procedure.
Isolate
total RNA from your experimental biological source material
using an appropriate kit and method. Enzymatically convert
the RNA into a biotinylated cDNA target with the
AmpoLabeling-LPR™ Kit in a standard thermal cycler.
Hybridize the labeled target to the cDNA GEArray
microarrays in their own plastic disposable hybridization
tube in a standard hybridization oven. Detect the
microarray with the Chemiluminescent Detection Kit reagents
and either a Chemi-Doc imaging system (CCD camera) or X-ray
film. Acquire and analyze the data with our web-based
software package.
Learn
about our other GEArray technologies:
Custom GEArray [here], Oligo GEArray [here],
and PCR Array [here]
SABiosciences provides a full range of solutions for your gene
expression profiling needs:
-
Find a pathway-focused GEArray by clicking the applications on the
left or browse through our complete microarray
listing.
- Customize a GEArray to suit your specific research needs. (For
more information, click here.)
- Complete array processing services are also available from
SABiosciences' in-house array core lab. (For more information, click
here.)
- Read [this] about the reagents & equipment required to setup
the GEArray in your lab.
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